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ShareLoc—an open platform for sharing localization microscopy data

Wei Ouyang, Jiachuan Bai, Manish Kumar Singh, Christophe Leterrier, Paul Barthelemy, Samuel FH Barnett, Teresa Klein, Markus Sauer, Pakorn Kanchanawong, Nicolas Bourg, others

Subcellular mapping of the protein landscape of SARS-CoV-2 infected cells for target-centric drug repurposing (preprint)

Jayasankar Mohanakrishnan Kaimal, Marianna Tampere, Trang H Le, Ulrika Axelsson, Hao Xu, Hanna Axelsson, Anna Backstrom, Francesco Marabita, Elisabeth Moussaud-Lamodiere, Duncan Njenda, others

Uncovering molecular grammars of intrinsically disordered regions that organize nucleolar fibrillar centers

Matthew R King, Andrew Z Lin, Kiersten M Ruff, Mina Farag, Wei Ouyang, Michael D Vahey, Emma Lundberg, Rohit V Pappu

A multi-scale map of cell structure fusing protein images and interactions

Yue Qin, Edward L Huttlin, Casper F Winsnes, Maya L Gosztyla, Ludivine Wacheul, Marcus R Kelly, Steven M Blue, Fan Zheng, Michael Chen, Leah V Schaffer, others

DeepImageJ: A user-friendly environment to run deep learning models in ImageJ

Estibaliz Gomez de Mariscal, Carlos Garcı́a-López-de-Haro, Wei Ouyang, Laurene Donati, Emma Lundberg, Michael Unser, Arrate Munoz-Barrutia, Daniel Sage

Interactive biomedical segmentation tool powered by deep learning and ImJoy

Wei Ouyang, Trang Le, Hao Xu, Emma Lundberg

Pycro-Manager: open-source software for customized and reproducible microscope control

Henry Pinkard, Nico Stuurman, Ivan E Ivanov, Nicholas M Anthony, Wei Ouyang, Bin Li, Bin Yang, Mark A Tsuchida, Bryant Chhun, Grace Zhang, others

Super-resolution visualization and modeling of human chromosomal regions reveals cohesin-dependent loop structures

Xian Hao, Jyotsana J Parmar, Benoı̂t Lelandais, Andrey Aristov, Wei Ouyang, Christian Weber, Christophe Zimmer

Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder

Lovisa Stenström, Diana Mahdessian, Christian Gnann, Anthony J Cesnik, Wei Ouyang, Manuel D Leonetti, Mathias Uhlén, Sara Cuylen-Haering, Peter J Thul, Emma Lundberg

Analysis of the human protein atlas image classification competition

Wei Ouyang, Casper F Winsnes, Martin Hjelmare, Anthony J Cesnik, Lovisa Åkesson, Hao Xu, Devin P Sullivan, Shubin Dai, Jun Lan, Park Jinmo, others