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Macromolecular Condensation Organizes Nucleolar Sub-Phases to Set Up a pH Gradient

Matthew R King, Kiersten M Ruff, Andrew Z Lin, Avnika Pant, Mina Farag, Jared Lalmansingh, Tingting Wu, Wei Ouyang, Martin J Fossat, Matthew D Lew, others

BioImage. IO Chatbot: A Personalized Assistant for BioImage Analysis Augmented by Community Knowledge Base

Wanlu Lei, Caterina Fuster-Barceló, Arrate Munoz-Barrutia, Wei Ouyang

Building the next generation of virtual cells to understand cellular biology

Graham T Johnson, Eran Agmon, Matthew Akamatsu, Emma Lundberg, Blair Lyons, Wei Ouyang, Omar A Quintero-Carmona, Megan Riel-Mehan, Susanne Rafelski, Rick Horwitz

JDLL: A library to run Deep Learning models on Java bioimage informatics platforms

Carlos Garcia Lopez de Haro, Stephane Dallongeville, Thomas Musset, Estibaliz Gomez de Mariscal, Daniel Sage, Wei Ouyang, Arrate Munoz-Barrutia, Jean-Yves Tinevez, Jean-Christophe Olivo-Marin

Moving beyond the desktop: prospects for practical bioimage analysis via the web

Wei Ouyang, Kevin W Eliceiri, Beth A Cimini

OME-Zarr: a cloud-optimized bioimaging file format with international community support

Josh Moore, Daniela Basurto-Lozada, Sébastien Besson, John Bogovic, Jordão Bragantini, Eva M Brown, Jean-Marie Burel, Xavier Casas Moreno, Gustavo de Medeiros, Erin E Diel, others

An Open-Source Modular Framework for Automated Pipetting and Imaging Applications

Wei Ouyang, Richard W Bowman, Haoran Wang, Kaspar E Bumke, Joel T Collins, Ola Spjuth, Jordi Carreras-Puigvert, Benedict Diederich

Analysis of the human protein atlas weakly supervised single-cell classification competition

Trang Le, Casper F Winsnes, Ulrika Axelsson, Hao Xu, Jayasankar Mohanakrishnan Kaimal, Diana Mahdessian, Shubin Dai, Ilya S Makarov, Vladislav Ostankovich, Yang Xu, others

Bioimage model zoo: a community-driven resource for accessible deep learning in bioimage analysis

Wei Ouyang, Fynn Beuttenmueller, Estibaliz Gomez de Mariscal, Constantin Pape, Tom Burke, Carlos Garcia Lopez de Haro, Craig Russell, Lucı́a Moya-Sans, Cristina de-la-Torre-Gutiérrez, Deborah Schmidt, others

FISH-quant v2: a scalable and modular tool for smFISH image analysis

Arthur Imbert, Wei Ouyang, Adham Safieddine, Emeline Coleno, Christophe Zimmer, Edouard Bertrand, Thomas Walter, Florian Mueller